Course

Genomic Data Science

Johns Hopkins University

Explore the revolution in medical discoveries with Genomic Data Science. Master the tools and techniques at the forefront of next generation sequencing experiments, genomic technologies, and genome analysis. This specialization teaches the application of statistics and data science to the genome and provides a deep understanding of DNA, RNA, and epigenetic patterns.

  • Understand the basic biology of modern genomics and the experimental tools used to measure it.
  • Learn Python programming language and iPython notebook for genomic data science.
  • Gain knowledge of computational methods and algorithms for analyzing DNA sequencing data.
  • Discover the command line tools needed to manage and analyze large sets of genomic data.
  • Learn to use tools from the Bioconductor project to perform analysis of genomic data.
  • Get introduced to the statistics behind popular genomic data science projects.

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Genomic Data Science
Course Modules

This specialization consists of six modules covering the basic biology of modern genomics, Python programming, algorithms for DNA sequencing, command line tools, Bioconductor usage, and statistics behind popular genomic data science projects.

Introduction to Genomic Technologies

This course introduces the basic biology of modern genomics and the experimental tools used to measure it. It covers the Central Dogma of Molecular Biology and explains how next-generation sequencing can be used to measure DNA, RNA, and epigenetic patterns. Additionally, it provides an introduction to the key concepts in computing and data science required to understand how data from next-generation sequencing experiments are generated and analyzed.

Python for Genomic Data Science

This class provides an introduction to the Python programming language and the iPython notebook, essential for genomic data science. It equips learners with the knowledge to use Python for data analysis and manipulation in the context of genomics.

Algorithms for DNA Sequencing

Discover computational methods and algorithms for analyzing DNA sequencing data. Gain insights into DNA, genomics, and the utilization of Python to implement key algorithms and analyze real genomes and DNA sequencing datasets.

Command Line Tools for Genomic Data Science

This module introduces the commands needed to manage and analyze directories, files, and large sets of genomic data efficiently using the command line. It provides essential skills for data scientists working with genomic data.

Bioconductor for Genomic Data Science

Learn to use tools from the Bioconductor project to perform analysis of genomic data. Understand how to leverage Bioconductor for genomic data science, including its applications and benefits in data analysis and interpretation.

Statistics for Genomic Data Science

Gain an introduction to the statistics behind the most popular genomic data science projects. This module equips learners with the statistical knowledge required for effective analysis and interpretation of genomic data.

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