Course

Introduction to Neurohacking In R

Johns Hopkins University

Unlock the potential of neuroimaging data with Introduction to Neurohacking In R. This course, offered by Johns Hopkins University, delves into the application of the R programming language for the manipulation, processing, and analysis of publicly-available structural MRI. Through this comprehensive learning experience, you will master the ability to read and write brain images in the NIfTI format, explore and visualize these images, and execute inhomogeneity correction, brain extraction, and image registration.

Structured into modules, the course covers a range of topics including neuroimaging formats and visualization, image processing, and extended image processing. Each module provides a deep dive into relevant concepts and techniques, ensuring that you acquire a thorough understanding of the subject matter.

By the conclusion of the course, you will possess the proficiency to perform in-depth analysis and manipulation of neuroimaging data using the R programming language, enhancing your capabilities in the field of neurohacking.

Certificate Available ✔

Get Started / More Info
Introduction to Neurohacking In R
Course Modules

This comprehensive course is divided into modules covering neuroimaging formats and visualization, image processing, and extended image processing, providing a deep understanding of each concept.

Introduction

Introduction to the course and the team behind it, along with an overview of structural MRI and its application in R.

  • Meet the Team
  • Introduction to Structural MRI in R
  • Syllabus
  • Theme 1 Quiz

Neuroimaging: Formats and Visualization

Explore neuroimaging formats, basic visualization, data manipulation, transformations, and MRI contrasts, providing a foundation for subsequent modules.

  • Data Structures and Operations
  • The NIfTI Format
  • Basic Visualization
  • Transformations and Smoothing
  • Basic MRI Contrasts
  • New Reading
  • Theme 2 Lecture Quizzes

Image Processing

Gain insights into image preprocessing, registration, and manipulation using fslr and ANTsR, essential for effective neuroimaging analysis.

  • Preprocessing: An Overview
  • Registration
  • fslr: System Requirements
  • Bias Field Correction Using fslr
  • Brain Extraction using fslr
  • Image Registration Using fslr
  • Installing ANTsR
  • Basic Data Manipulation with ANTsR
  • Pre-Processing with ANTSR
  • Theme 3 Quizzes

Extended Image Processing

Dive into advanced brain image processing, co-registration, and tissue-level segmentation, further enhancing your neuroimaging analysis skills.

  • Advanced Brain Image Processing
  • Co-Registration using fslr and ANTsR
  • Wrapper Functions for Processing Pipelines
  • Registration to a Template
  • Nonlinear Registration of T1 to Template
  • Tissue-Level Segmentation
  • Papayar: Interactively Viewing Images in R
  • Papayar Script
  • Theme 4 Quizzes
More Data Analysis Courses

CertNexus Certified Data Science Practitioner

CertNexus

This course will equip business professionals with the skills to extract, analyze, and present data effectively, enhancing their ability to address business issues...

Total Data Quality

University of Michigan

Total Data Quality specialization provides comprehensive training on evaluating data quality, emphasizing the initial steps of data science. Learners gain insights...

Data Mining Project

University of Colorado Boulder

Data Mining Project offers hands-on experience in designing and implementing real-world data mining projects, providing step-by-step guidance from problem formulation...

Serverless Data Processing with Dataflow: Develop Pipelines en Español

Google Cloud

Serverless Data Processing with Dataflow: Develop Pipelines en Español is a comprehensive course that delves into the intricacies of developing data pipelines with...