Lecture

Accelerated Molecular Dynamics, Kinetic Monte Carlo, and Inhomogeneous Spatial Coarse Graining

We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.


Course Lectures
  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • Case Studies of DFT
    Nicola Marzari

    We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • Molecular Dynamics I
    Nicola Marzari

    We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • Molecular Dynamics II
    Nicola Marzari

    We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • Model Hamiltonions
    Nicola Marzari

    We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.

  • We revisit the shortest paths problem, considering the case where the input is a directed minor-free graph with negative arc lengths (but no negative-length cycles).In Lecture 14, we saw almost-linear-time algorithms for the case of planar and bounded-genus graphs. Currently, comparable bounds for minor-free graphs are not known. We shall discuss Goldberg's algorithm, a shortest-path algorithm for general graphs with integer lengths, whose running time depends logarithmically on the magnitude of the largest negative arc length. By exploiting separators (Lecture 6), it runs faster on minor-free graphs than on general graphs, but it still requires superlinear time.