Course

Deep learning in Electronic Health Records - CDSS 2

University of Glasgow

Delve into the principles of Deep Learning and its application in Electronic Health Records with the Deep learning in Electronic Health Records - CDSS 2 course. This comprehensive program explores the utilization of deep learning architectures, including Multi-layer perceptron, Convolutional Neural Networks, and Recurrent Neural Networks for time-series classification, particularly focusing on vital signals like ECG.

Throughout the course, you will tackle the complexities of EHR such as missing values and data heterogeneity, and learn effective imputation techniques and data encoding strategies. With a special emphasis on the MIMIC-III database, you will gain practical experience in formulating clinical prediction benchmarks from EHR data.

  • Gain insights into deep learning architectures and their application in EHR
  • Explore time-series classification for vital signals like ECG
  • Tackle challenges of missing values and data heterogeneity in EHR
  • Learn effective imputation techniques and data encoding strategies
  • Practical experience in formulating clinical prediction benchmarks from MIMIC-III database

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Deep learning in Electronic Health Records - CDSS 2
Course Modules

The course unfolds in four modules covering Artificial Intelligence and Multi-Layer Perceptron, Convolutional and Recurrent Neural Networks, Preprocessing and imputation of MIMIC III data, and EHR Encodings for machine learning models. Each module offers in-depth insights and practical exercises to enhance your understanding and skills in applying deep learning to EHR data.

Artificial Intelligence and Multi-Layer Perceptron

Module 1 - Artificial Intelligence and Multi-Layer Perceptron

  • Gain insights into Artificial Intelligence and Multi-Layer Perceptron
  • Explore the training and optimization of Multi-Layer Perceptron
  • Practical exercises for pre-processing and classification of ECG data

Convolutional and Recurrent Neural Networks.

Module 2 - Convolutional and Recurrent Neural Networks

  • Learn about Convolutional Neural Networks and Recurrent Neural Networks
  • Evaluate learning algorithms and practical exercises for classification using different models
  • Dimensionality reduction techniques to visualize ECG data

Preprocessing and imputation of MIMIC III data

Module 3 - Preprocessing and imputation of MIMIC III data

  • Benchmark Deep Learning Models with EHR and practical exercises in data extraction and preprocessing
  • Imputation strategies and practical exercises for in-hospital mortality prediction

EHR Encodings for machine learning models

Module 4 - EHR Encodings for machine learning models

  • Understand different encodings for categorical and continuous variables
  • Practical exercises in representation learning and similarity encodings
  • End of course summative quiz
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